Figure 6.

Depletion of Rpb1 or Bdf1 alters Taf1 binding in vivo. (A) ChIP-seq for Taf1 or TBP was performed from cells before or after a 60-min depletion of Rpb1 or Bdf1 by Anchor Away. Normalized reads (reads per million) were mapped, and differences were plotted as heat maps, showing individual genes sorted by the classes defined in Figure 2 (see also Supplemental Fig. S7A,B). (B) The ratios of total TBP and Taf1 reads for each promoter were calculated and plotted as quartile box and whisker plots.