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. 2017 Nov 18;55(1):64–71. doi: 10.1136/jmedgenet-2017-104922

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Summary plots of GWAS results. (A) Quantile–quantile (Q–Q) plot of the negative logarithm of the observed (y-axis) and expected (x-axis) P value for each SNP, where the red line represents the null hypothesis of no associations. B) Manhattan plot showing association signals in TERC, TERT and RTEL1 regions. The –log₁₀(P values) are plotted against physical position for 6.3 million SNPs. The red line indicates the genome-wide significance threshold at P=5×10^–8. We used a threshold of P=1×10^–5 to define suggestive signals (blue line). GWAS, genome-wide association study.