Table 1. Summary data for the 4 complete sequenced isolates and genomes.
Characteristic | Isolate | |||
---|---|---|---|---|
00–0949 | 01–1512 | 00–6200 | 00–1597 | |
HS (Penner) serotype | HS:2 | HS:2 | HS:4,13 | HS:9,37 |
MLST sequence type (ST) | 8 | 8 | 806 | 930 |
MLST clonal complex (CC) | ST-21 | ST-21 | ST-21 | NA |
Genes | 1,974 | 1,971 | 1,755 | 1,817 |
CDS | 1,884 | 1,885 | 1,673 | 1,721 |
Pseudo Genes | 36 | 32 | 28 | 42 |
CRISPR arrays | 1 | 1 | 1 | 1 |
rRNAs (5S, 16S, 23S) | 3, 3, 3 | 3, 3, 3 | 3, 3, 3 | 3, 3, 3 |
Complete rRNAs (5S, 16S, 23S) | 3, 3, 3 | 3, 3, 3 | 3, 3, 3 | 3, 3, 3 |
tRNAs | 44 | 44 | 44 | 44 |
ncRNA | 1 | 1 | 1 | 1 |
Frameshifted genes | 25 | 22 | 26 | 33 |
Frameshifted genes on monomer runs | 3 | 3 | 4 | 11 |
Frameshifted genes not on monomer runs | 3 | 4 | 3 | 2 |
Plasmids | 2 | 2 | 0 | 0 |
Size of invertible region (bp) | 88,465 | 88,465 | 89,946 | 96,109 |
GenBank accession numbers for the isolate data in this table: 00–0949, NZ_CP010301; 00–1512, NZ_CP010072; 00–6200, NZ_CP010307, 00–1597, NZ_CP010306.
NA, not applicable, meaning the ST was not assigned to a clonal complex.