Table 3.
List of R. prowazekii ORFs exhibiting different transcription start sites during their in vitro expression in HMECs and AAE2 cells
| Locus Tag | HMEC-T | AAE2-T | Strand | Annotation |
|---|---|---|---|---|
| H375_0890 | 119283 | 119025 | + | Transcription termination factor Rho |
| H375_0950 | 128486 | 128393 | + | Ribosome hibernation protein YhbH |
| H375_2140 | 285600 | 285557 | + | Rickettsial conserved |
| H375_3140 | 400166 | 400204 | − | Membrane-bound metallopeptidase |
| H375_3150 | 400514 | 400453 | + | Ribose 5-phosphate isomerase B |
| H375_3390 | 427957 | 427919 | + | Hypothetical protein |
| H375_3530 | 443893 | 443878 | + | GTP-binding protein TypA |
| H375_3540 | 447237 | 447188 | − | Pyruvate dehydrogenase E1 subunit |
| H375_3630 | 457043 | 457059 | + | UDP-3-O-[3-hydroxymyristoyl] N-Acetylglucosamine deacetylase |
| H375_3640 | 458837 | 458779 | + | Membrane c-type cytochrome cy |
| H375_3710 | 466907 | 466938 | − | Hypothetical protein |
| H375_3800 | 472515 | 472467 | + | Pole remodelling regulatory diguanylate cyclase |
| H375_3940 | 488473 | 488445 | − | Type I secretion outer membrane protein, TolC |
| H375_4120 | 513479 | 513553 | − | Peptide deformylase |
| H375_4800 | 591148 | 591116 | + | Integral membrane protein |
| H375_5400 | 666077 | 666043 | + | Aspartate aminotransferase |
| H375_8580 | 1041290 | 1041233 | + | Outer membrane protein Imp |
| H375_9020 | 1076523 | 1076555 | − | Heat shock protein GrpE |