| NMR | Nuclear magnetic resonance |
| SAXS | Small-angle X-ray scattering |
| PPI | Protein–protein interaction |
| TAP | Tandem affinity purification |
| Co-IP | Co-immunoprecipitation |
| CD | Circular Dichroism |
| ECs | Evolutionary couplings |
| GPU | Graphics processing unit |
| NOE | Nuclear Overhauser effect |
| RDC | Residual dipolar coupling |
| Cryo-EM | Cryo-electron microscopy |
| PDB | Protein Data Bank |
| RMSD | Root mean square deviation |
| CASP | Critical Assessment of techniques for Structure Prediction |
| CAPRI | Critical assessment of prediction of interactions |
| CAMEO | Continuous automated model evaluation |
| LDDT | Local distance difference test on all atoms |
| 3DZD | 3D Zernike descriptor |
| FFT | Fast Fourier transform |