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. Author manuscript; available in PMC: 2018 Apr 20.
Published in final edited form as: J Phys Chem B. 2017 Mar 30;121(15):3871–3881. doi: 10.1021/acs.jpcb.7b00672

Table 2.

Model parameters and diffusion rates used in the S. cerevisiae and HeLa models.

Parameter Model
S. cerevisiae HeLa
Time step [μs] 67.0 10.7
Lattice dimensions 192 × 192 × 192 224 × 128 × 224
Lattice spacing [nm] 28.7 8.0
Inducer diffusion rate [μm2 s−1] 2.045
mRNA diffusion rate [μm2 s−1] 0.5 0.5
Protein diffusion rate [μm2 s−1] 1.0 1.0
Protein diffusion rate (membrane) [μm2 s−1] 0.01
Maximum diffusion rate [μm2 s−1] 2.045 1.0