Actinobacteria/Actinobacteria
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Bifidobacteriales/Bifidobacteriaceae
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Bifidobacterium
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↓
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↓ (100 +) ↑ (105 +) |
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Micrococales/Microccocaeae
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↑
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Actinobacteria/Coriobacteriia
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Eggerthellales/Eggerthellaceae
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Eggerthella (E. lenta)
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↑
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↑ (105 +) |
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Bacteroidetes/Bacteroidia
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Bacteroidales/Bacteroidaceae
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↓ |
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Bacteroidales/Odoribacteraceae
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Odoribacter, Butyricimonas
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↑ |
↓
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Bacteroidales/Porphyromonadaceae
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Parabacteroides
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↓
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Firmicutes/Bacilli
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Bacillales/Bacillaceae
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Bacillus
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↑
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Bacillales/Staphylococcaceae
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Staphylococcus
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↑
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Lactobacillales/Lactobacillaceae
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Lactobacillus
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↓
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Firmicutes/Clostridia
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Clostridiales/Christensenellaceae
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↑ (105 +) |
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↑
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Clostridiales/Clostridiaceae
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↑
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Clostridiales/Clostridiales incertae sedis
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Mogibacteriaceae
|
Periodontal |
|
↑ (105 +) |
|
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Clostridiales/Eubacteriaceae
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Eubacterium (E. limosum)
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Clostridium cluster XIVa |
↑
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Eubacterium (E. hallii, E. ventriosum)
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↓
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Clostridiales/Lachnospiraceae
|
Blautia, Lachnobacterium (L. bovis, C. Sphenoides), Tyzzerella (C. Colinum)
|
↓
|
|
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↑ Lachnospiraceae (OTU173) |
↓
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Coprococcus
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↓
|
↓
|
↓
|
↓
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Roseburia (R. intestinalis)
|
↓
|
↓
|
↑
|
↓
|
unclassified Lachnospiraceae (E. rectale)
|
↓
|
|
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Clostridiales/Ruminococcaceae
|
Anaerotruncus (A. colihominis)
|
Clostridium cluster IV |
↑
|
↑ (105 +) |
|
↑ Ruminococcaceae (OTU018) |
|
Faecalibacterium (F. prausnitzii)
|
↓
|
↓ |
↓ |
↓ |
Oscillospira
|
|
↑ |
↑ OTU411, ↓ OTU 163 |
|
Papillibacter (P. cinnamovorans)
|
↓
|
|
↑ OTU316, OTU321, OTU69, OTU201, OTU598, OTU388; ↓ OTU732, OTU347, OTU616, OTU427 |
|
Ruminiclostridium (C. Leptum)
|
↑
|
|
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Sporobacter (S. termiditis)
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↑
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Firmicutes/Negativicutes
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Selenomonadales/Selenomonadaceae
|
Megamonas, Mitsuokella
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|
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↓
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Fusobacteria/Fusobacteriia
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Fusobacteriales/Fusobacteriaceae
|
Fusobacterium
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↑
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Proteobacteria/Betaproteobacteria
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Burkholderiales/Sutterellaceae
|
Sutterella
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↓
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Proteobacteria/Deltaproteobacteria
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Desulfovibrionales/Desulfovibrionaceae
|
Bilophila
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↑ (105 +) |
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Proteobacteria/Gammaproteobacteria
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Enterobacteriales/Budviciaceae
|
Leminorella
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↑
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Enterobacteriales/Enterobacteriaceae
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Escherichia (E. coli), Klebsiella (E. aerogens, K. Pneumoniae)
|
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↑
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↑
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↑
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Enterobacteriales/Morganellaceae
|
Proteus
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↑
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Enterobacteriales/Yersiniaceae
|
Serratia, Yersinia
|
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↑
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Pasteurellales/Pasteurellaceae
|
Haemophilus
|
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↑
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Pseudomonadales/Pseudomonadaceae
|
Pseudomonas
|
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↑
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Vibrionales/Vibrionaceae
|
Vibrio
|
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↑
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Synergistetes/Synergistia
|
Synergistales/Synergistaceae
|
|
Periodontal |
|
↑ (105 +) |
|
|
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Verrucomicrobia/Verrucomicrobiae
|
Verrucomicrobiales/Verrucomicrobiaceae
|
Akkermansia
|
|
=
|
↑ (105 +) |
↓
|
|
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