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. 2018 Jan 2;92(2):e01374-17. doi: 10.1128/JVI.01374-17

TABLE 3.

Group-defining sites in Australian GI.2 strains from May 2015 to October 2016

Virus groupa Virus protein
p16 (143)b p23/26 (224) 2C-like protein (351) p29 (275) VpGc (114) Protease (143) RdRpc (514) VP60 (579)
VP10 (117)
Non-P2 P2 (163)
1a S130Nd R170K I961V D1062E K1307R S2123Ne
1b
1c I1138V K1307R M1682V M87V
1d
1e V1391A
1f R2058K
2 A764E D1287E A1766V
3a E245G D262S N692Y A709S A1842S V2255I S2078N A2143Ve V62I V108I
3b V62I
4a L15S F131L K341R N928S D1287E A1360S V2132Me
4b L15S N54K F131L I1117V A2301T V2132Me A2143Ve
4c L15S F131L D1287E S2300L V2132Me A2143Ve A2126Se
a

Groups are arbitrarily defined in Fig. 4.

b

The length of the protein (number of amino acid residues) is given in parentheses.

c

Protein abbreviations: VpG, viral genome-linked protein; RdRp, RNA-dependent RNA polymerase.

d

Numbers refer to the amino acid residue site number according to numbering in GenBank accession KT280060.1.

e

Within an extended loop region (35).