Table 1. Statistics of the PRODORIC2 content (September 2017).
| Organism | TFBSs | PWMsa | Increase in %b |
|---|---|---|---|
| Bacillus licheniformis | 8 | 3 | new |
| Bacillus megaterium | 7 | 2 | new |
| Bacillus subtilis | 907 | 91(65) | 28 |
| Bradyrhizobium japonicum | 36 | 4(3) | 33 |
| Campylobacter jejuni | 5 | 2 | 100 |
| Clostridium acetobutylicum | 23 | 3 | new |
| Clostridium beijerinckii | 7 | 2 | new |
| Clostridium difficile 630 | 266 | 13(12) | new |
| Corynebacterium glutamicum | 59 | 6 | 500 |
| Dinoroseobacter shibae | 255 | 6 | new |
| Escherichia coli CFT073 | 4 | 2 | 100 |
| Escherichia coli str. K-12 substr. MG1655 | 1562 | 94(82) | 7 |
| Escherichia coli str. K-12 substr. W3110 | 76 | 6 | 50 |
| Helicobacter pylori | 24 | 3 | 50 |
| Listeria monocytogenes | 62 | 5 | 150 |
| Mycobacterium tuberculosis | 73 | 5 | 400 |
| Pseudomonas aeruginosa PAO1 | 444 | 41(36) | 86 |
| Rhodobacter sphaeroides | 38 | 6 | 50 |
| Salmonella enterica | 6 | 1 | - |
| Staphylococcus aureus COL | 34 | 2 | 100 |
| Staphylococcus aureus Newman | 2 | 1 | - |
| Streptococcus agalactiae | 5 | 1 | - |
| Streptococcus pyogenes MGAS5005 | 4 | 1 | - |
| Streptococcus pyogenes MGAS8232 | 10 | 2 | 100 |
| Streptococcus pyogenes | 3 | 1 | - |
| Synechococcus elongatus | 11 | 1 | - |
| Synechocystis | 16 | 3 | 200 |
| Sum | 3947 | 307(261) | 31 |
aThe non-redundant number of PWMs (in parentheses).
bBased on the total numbers.