Figure 3.

Output result from interaction visualization module. (A) Shown is interaction frequency heatmap ranged from 179 425 000 to 183 425 000 of chromosome 3 in H1 embryonic stem cell. The color of the heatmap indicates the level of normalized interaction frequencies and each triangle indicates topological association domain. (B) One-to-all interaction plot is shown for SOX2 promoter region as bait. Y-axes in the left and the right indicate bias-removed interaction frequency (blue bar graph) and distance-normalized interaction frequency (magenta dots), respectively. Green line indicates the cut-off for distance-normalized interaction frequency. (C) Shown is arc-representation of significant interaction for the given cut-off value defined by the green line in (B).