Table 1. Amount of links used for the positive gold standards, in total for all species: shared protein–protein interaction(PPI), KEGG signaling pathway (Signaling), KEGG metabolic pathway (Metabolic), shared protein complex (Complex), and organization in same operon (Operon).
Gold standard | FunCoup 4 |
---|---|
PPI | 115 799 |
Signaling | 4 805 854 |
Metabolic | 2 248 802 |
Complex | 1 854 271 |
Operon | 5895 |