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. 2018 Jan 4;19:16. doi: 10.1186/s12864-017-4408-9

Table 3.

TALEs and their RVDs from X. citri strains compared in this study with their location on respective plasmids

Plasmid number Plasmid size TALE classes
Class I
(repeat number) (contains pthA2 and 3 of Xc-A306)
Class II
(repeat number) (contains pthA4 of Xc-A306)
Class III
(repeat number) (contains pthA1 of Xc-A306)
Class IV (repeat number)
Xc-A306 2 Plasmid 1 33,700 15.5 16.5
Plasmid 2 64,920 15.5 17.5
Xc-03-1638-1-1 Argentina 2 Plasmid 1* 249,703
Plasmid 2 99,153 15.5 (×2) 17.5 21.5
LJ207–7 Reunion 3 Plasmid 1* 213,743
Plasmid 2 94,139 15.5 17.5 18.5
Plasmid 3 49,382 21.5
LM180 (additional pseudo TALE on plasmid 2) Argentina 4 Plasmid 1* 249,697
Plasmid 2 64,978 13.5
Plasmid 3 43,340 17.5
Plasmid 4 28,949 6.5
LM199 Argentina 2 Plasmid 1* 197,085
Plasmid 2 64,935 15.5
LH201 Reunion 2 Plasmid 1* 213,737
Plasmid 2 92,707 15.5 17.5 21.5
LH276 Reunion 3 Plasmid 1* 211,337
Plasmid 2 73,024 15.5 21.5
Plasmid 3 51,192 22.5 (pseudo)
LL074–4 Martinique 2 Plasmid 1* 220,688
Plasmid 2 92,708 15.5 17.5 21.5
Plasmid 2 47,756

*Copper resistant plasmid

TALEs were grouped as classes based on their RVD sequences [24]