Table 2. Family and genera abundance in liquid manure samples (flushed, primary lagoon, secondary lagoon manure).

SN	Flushed manure (FP)			Primary lagoon manure (PL)			Secondary lagoon manure (SL)
	Name	Class	Avg (± std.)	Name	Class	Avg (± std.)	Name	Class	Avg (± std.)
1	Other Bacteria	b	0.181	Other Bacteria	b	0.124	Other Bacteria	b	0.162
			(±0.033)			(±0.026)			(±0.082)
2	Ruminococcaceae	f	0.09	Flavobacteriaceae	f	0.073	Psychrobacter	g	0.098 (±0.138)
			(±0.024)			(±0.036)
3	Clostridium XI	g	0.051	Ruminococcaceae	f	0.067	Flavobacteriaceae	f	0.076
			(±0.030)			(±0.038)			(±0.055)
4	Flavobacteriaceae	f	0.028	Petrimonas	g	0.051	Clostridium XI	g	0.03
			(±0.021)			(±0.068)			(±0.039)
5	Cloacibacillus	g	0.025	Clostridium XI	g	0.048	Cloacibacillus	g	0.026
			(±0.020)			(±0.051)			(±0.023)
6	Trichococcus	g	0.024	Cloacibacillus	g	0.045	Ruminococcaceae	f	0.026
			(±0.017)			(±0.037)			(±0.035)
7	Facklamia	g	0.024	Proteiniphilum	g	0.026	Pseudomonas	g	0.025
			(±0.027)			(±0.022)			(±0.044)
8	Lachnospiraceae	f	0.024	Anaerovorax	g	0.02	Petrimonas	g	0.021
			(±0.009)			(±0.015)			(±0.016)
9	Saccharibacteria	g	0.024	Bacteroides	g	0.017	Planomicrobium	g	0.019
			(±0.021)			(±0.012)			(±0.034)
10	Clostridium IV	g	0.017	Candidatus Cloacamonas	g	0.017	Acholeplasma	g	0.018
			(±0.009)			(±0.019)			(±0.019)
11	Bacteroides	g	0.016	Lutaonella	g	0.014	Proteiniphilum	g	0.017
			(±0.015)			(±0.007)			(±0.014)
12	Turicibacter	g	0.014	Turicibacter	g	0.011	Candidatus cloacamonas	g	0.016
			(±0.009)			(±0.010)			(±0.019)
13	Psychrobacter	g	0.014	Veillonellaceae	f	0.011	Chromatiaceae	f	0.014
			(±0.027)			(±0.009)			(±0.028)
14	Petrimonas	g	0.012	Clostridium XlVa	g	0.01	Veillonellaceae	f	0.012
			(±0.011)			(±0.004)			(±0.004)
15	Porphyromonadaceae	f	0.011	Levilinea	g	0.009	Anaerovorax	g	0.012
			(±0.005)			(±0.005)			(±0.004)