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. Author manuscript; available in PMC: 2018 Jan 5.
Published in final edited form as: CEUR Workshop Proc. 2016 Sep;1609:28–42.

Table 7.

System performance for normalized entity recognition on the MEDLINE test corpus. Data shown in italic font presents runs that were submitted after the official deadline. The median and average are computed solely using the official runs. A * symbol indicates statistically significant difference of a run with the runs ranked before and after it, per student test.

Team TP FP FN Precision Recall F-measure
Erasmus-run3.unofficial* 1943 1320 1220 0.596 0.614 0.605
Erasmus-run1* 1948 2802 1519 0.410 0.562 0.474
Erasmus-run2* 1917 2833 1457 0.404 0.568 0.472
BITEM-run1* 1187 1911 1220 0.383 0.4931 0.431
SIBM-run2* 1012 2083 1108 0.327 0.477 0.388
SIBM-run1* 1102 1993 1638 0.356 0.402 0.378

average 0.376 0.501 0.429
median 0.383 0.493 0.431