Table 5.
Frobenius (F) distances between distance matrices of WGS and array data
| Array_all | Array_MAF5 | GG | GG_MAF5 | Pruned | Pruned_MAF5 | Pruned_GG | Pruned_GG_MAF5 | |
|---|---|---|---|---|---|---|---|---|
| Array_all | 5.312 ± 0.001 | |||||||
| Array_MAF5 | 0.591 | 5.889 ± 0.001 | ||||||
| GG | 1.239 | 0.685 | 6.501 ± 0.001 | |||||
| GG_MAF5 | 1.434 | 0.868 | 0.200 | 6.700 ± 0.001 | ||||
| Pruned | 2.230 | 2.810 | 3.397 | 3.596 | 3.152a ± 0.001 | |||
| Pruned_MAF5 | 1.332 | 1.886 | 2.447 | 2.644 | 0.971 | 4.115 ± 0.001 | ||
| Pruned_GG | 1.034 | 1.530 | 2.038 | 2.232 | 1.417 | 0.462 | 4.548 ± 0.002 | |
| Pruned_GG_MAF5 | 0.811 | 1.216 | 1.676 | 1.867 | 1.800 | 0.836 | 0.329 | 4.931 ± 0.002 |
The diagonal is a mean of the F distance between the array data set and 100 WGS replicates with the standard errors (SE)
aNumbers in bold face represent the best value in the column