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. 2018 Jan 4;11:239–252. doi: 10.2147/OTT.S114276

Table S1.

Sequence of oligonucleotides used in this study

Primer name Sequence 5′→3′ Note
Paired oligonucleotides for the cloning of miRNA expression vectors
miR-99a_Top TGCTGAACCCGTAGATCCGATCTTGTGGTTTTGGCCACTGACTGACCACAAGATGATCTACGGGTT Matured hsa-miR-99a-5p sequence is underlined
miR-99a_Bot CCTGAACCCGTAGATCATCTTGTGGTCAGTCAGTGGCCAAAACCACAAGATCGGATCTACGGGTTC
miR-28-5p_Top TGCTGAAGGAGCTCACAGTCTATTGAGGTTTTGGCCACTGACTGACCTCAATAGTGTGAGCTCCTT Matured miR-28-5psequence is underlined
miR-28-5p_Bot CCTGAAGGAGCTCACACTATTGAGGTCAGTCAGTGGCCAAAACCTCAATAGACTGTGAGCTCCTTC
Paired oligonucleotides for the cloning of reporter constructs
mTOR-TS_Top CTAGCTGGGGAACAGAAGATCCATAACTTTAGAAATACGGGTTTTGACTTAACG Seed sequences of miR-99a in mTOR 3′-UTR are boxed
mTOR-TS_Bot TCGACGTTAAGTCAAAACCCGTATTTCTAAAGTTATGGATCTTCTGTTCCCCAG
mTOR-MTS_Top TCGAGTGGGGAACAGAAGATCCATAACTTTAGAAAATGCCCATTTGACTTAACGC Mutated seed sequences of mTOR are boxed
mTOR-MTS_Bot GGCCGCGTTAAGTCAAATGGGCATTTTCTAAAGTTATGGATCTTCTGTTCCCCAC
99a-PTS_Top CTAGCCACAAGATCGGATCTACGGGTTGATATCCACAAGATCGGATCTACGGGTTATAACACAAGATCGGATCTACGGGTTC Three miR-99a-5p positive targeting sites are underlined
99a-PTS_Bot TCGAGAACCCGTAGATCCGATCTTGTGTTATAACCCGTAGATCCGATCTTGTGGATATCAACCCGTAGATCCGATCTTGTGG
Primers used in QPCR detection of mTOR expression
mTOR_5QP AGACACCCATCCAACCTGAT NM_004958; amplicon: 85 bps
mTOR_3QP TCATAGCAACCTCAAAGCAGTC
EGFP_5QP CGACGGCAACTACAAGAC
EGFP_3QP TAGTTGTACTCCAGCTTGTGC

Abbreviations: Bot, bottom; miRNA, microRNA; mTOR, mammalian target of rapamycin; 3′-UTR, 3′ untranslated region; QPCR, quantitative polymerase chain reaction; EGFP, enhanced green fluorescent protein.