Table S1.
Sequence of oligonucleotides used in this study
Primer name | Sequence 5′→3′ | Note |
---|---|---|
Paired oligonucleotides for the cloning of miRNA expression vectors | ||
miR-99a_Top | TGCTGAACCCGTAGATCCGATCTTGTGGTTTTGGCCACTGACTGACCACAAGATGATCTACGGGTT | Matured hsa-miR-99a-5p sequence is underlined |
miR-99a_Bot | CCTGAACCCGTAGATCATCTTGTGGTCAGTCAGTGGCCAAAACCACAAGATCGGATCTACGGGTTC | |
miR-28-5p_Top | TGCTGAAGGAGCTCACAGTCTATTGAGGTTTTGGCCACTGACTGACCTCAATAGTGTGAGCTCCTT | Matured miR-28-5psequence is underlined |
miR-28-5p_Bot | CCTGAAGGAGCTCACACTATTGAGGTCAGTCAGTGGCCAAAACCTCAATAGACTGTGAGCTCCTTC | |
Paired oligonucleotides for the cloning of reporter constructs | ||
mTOR-TS_Top | CTAGCTGGGGAACAGAAGATCCATAACTTTAGAAATACGGGTTTTGACTTAACG | Seed sequences of miR-99a in mTOR 3′-UTR are boxed |
mTOR-TS_Bot | TCGACGTTAAGTCAAAACCCGTATTTCTAAAGTTATGGATCTTCTGTTCCCCAG | |
mTOR-MTS_Top | TCGAGTGGGGAACAGAAGATCCATAACTTTAGAAAATGCCCATTTGACTTAACGC | Mutated seed sequences of mTOR are boxed |
mTOR-MTS_Bot | GGCCGCGTTAAGTCAAATGGGCATTTTCTAAAGTTATGGATCTTCTGTTCCCCAC | |
99a-PTS_Top | CTAGCCACAAGATCGGATCTACGGGTTGATATCCACAAGATCGGATCTACGGGTTATAACACAAGATCGGATCTACGGGTTC | Three miR-99a-5p positive targeting sites are underlined |
99a-PTS_Bot | TCGAGAACCCGTAGATCCGATCTTGTGTTATAACCCGTAGATCCGATCTTGTGGATATCAACCCGTAGATCCGATCTTGTGG | |
Primers used in QPCR detection of mTOR expression | ||
mTOR_5QP | AGACACCCATCCAACCTGAT | NM_004958; amplicon: 85 bps |
mTOR_3QP | TCATAGCAACCTCAAAGCAGTC | |
EGFP_5QP | CGACGGCAACTACAAGAC | |
EGFP_3QP | TAGTTGTACTCCAGCTTGTGC |
Abbreviations: Bot, bottom; miRNA, microRNA; mTOR, mammalian target of rapamycin; 3′-UTR, 3′ untranslated region; QPCR, quantitative polymerase chain reaction; EGFP, enhanced green fluorescent protein.