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. 2018 Jan 9;3(1):e00123-17. doi: 10.1128/mSystems.00123-17

FIG 4 .

FIG 4 

The tendency of genes to occur in the class of genomes that increased in relative abundance after antibiotics. Genes and modules strongly contributing to the principal components used in the machine learning model were identified, and class tendency was calculated using the ratio of the gene’s prevalence in the increased-abundance group to its prevalence in the decreased-abundance group. Genes associated with the increased-abundance class of genomes are colored red.