Table 3.
Minor allele frequencies of PDCD1 rs7568402 in our cohort compared to a multi-ethnic systemic JIA cohort*.
| Population |
Cases
n |
Controls
n |
Case MAF | Control MAF |
|---|---|---|---|---|
| Present study | 58 | 845 | 0.30 | 0.44 |
| Meta analyses results | ||||
| United States* | 243 | 1718 | 0.38 | 0.44 |
| United Kingdom | 202 | 4097 | 0.45 | 0.43 |
| Germany | 115 | 193 | 0.44 | 0.46 |
| Italy | 49 | 59 | 0.43 | 0.41 |
| Turkey | 49 | 94 | 0.35 | 0.32 |
| Brazil | 48 | 62 | 0.44 | 0.43 |
| Argentina | 33 | 115 | 0.35 | 0.35 |
| Canada | 17 | 427 | 0.44 | 0.40 |
MAF = minor allele frequency.
*Some of our cases (but not controls) were included in the US stratum of the meta-analysis.
Meta-analysis p value for SNP rs7568402 is p =0.35.