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. 2018 Feb;179:40–53. doi: 10.1016/j.jinorgbio.2017.11.002

Table 2.

Splitting events that separate ECs that use sites with different nuclearity (i.e. a different number of metal ions within the site). EC numbers associated to enzymes that use sites with different nuclearity e.g. in different organisms, were reported on the same line, with a list of all sites separated by “/”. See the caption to Table 1 for a further description of the contents in the various columns.

CATH code Metal role conserved Redox role Ion(s) EC diversity EC(s) Mechanism
3.40.630.10 Yes No Zn/Zn2 L2 3.5.1.18 Increases acidity and nucleophilicity of a water molecule and increases electrophilicity of substrate
Zn2 3.4.11.10
3.4.11.4
3.5.1.14
Zn 3.4.17.1
2.60.40.420 Yes Yes Cu L2 1.7.2.1 Electron relay to substrate
Cu2 1.10.3.2
3.20.20.150 Yes No Zn/Mn L1 4.2.1.8
5.3.1.22
Increases the acidity of the substrate
Divalent2 5.3.1.5
5.3.1.14
Divalent3 3.1.21.2
3.20.20.60 Yes No Mg2 L1 2.7.1.40 Stabilizes charges and increases substrate acidity
Mg 5.4.2.9
2.7.3.9
2.1.2.11
2.7.9.2
4.1.3.1
3.40.720.10 No No Mn2 L1 5.4.2.7 Increases nucleophilicity of a water molecule and electrophilicity of the phosphate moiety in the substrate
Zn2 3.1.3.1
Mn/Co
Ca/Mg
5.4.2.1
3.1.6.1
3.1.6.8
3.1.6.12
3.1.6.2
Stabilizes charges and increases electrophilicity of substrate
3.20.20.140 No No Zn2
Zn2/Fe2
Ni2
L1 3.5.2.3
3.4.13.19
3.5.1.25
3.5.4.2
3.5.1.5
Increases electrophilicity of the substrate and nucleophilicity of a second substrate or functional group.
Zn 5.3.1.12 Increases acidity of substrate