Table 1.
RFLP patterns of the spa gene among S. aureus isolates
Pattern | PCR product (bp) | Digested fragments (HindIII)a | Digested fragments (HinfI)a | Source | Number (%) | ||||
---|---|---|---|---|---|---|---|---|---|
C | P | B | Ch | Pa | |||||
No band | – | – | – | 0 | 0 | 2 | 1 | 0 | 3 (1.4) |
No digest | 725 | – | – | 0 | 3 | 0 | 0 | 0 | 3 (1.4) |
I | 1170 | 180-300-680 | 180-180-800 | 0 | 14 | 0 | 2 | 0 | 16 (7.7) |
II | 1170 | 180-300-680 | 180-180-775 | 2 | 1 | 0 | 0 | 0 | 3 (1.4) |
III | 1170 | 180-300-680 | 180-180-750 | 2 | 0 | 0 | 0 | 0 | 2 (0.96) |
IV | 1170 | 450-720 | 170-170-825 | 0 | 0 | 0 | 1 | 0 | 1 (0.48) |
V | 1200 | 180-470-550 | 180-180-180-650 | 0 | 0 | 35 | 0 | 1 | 36 (17.3) |
VI | 1270 | 180-300-750 | 180-180-750 | 0 | 1 | 0 | 0 | 0 | 1 (0.48) |
VII | 1270 | 180-470-630 | 170-180-180-775 | 0 | 0 | 1 | 0 | 0 | 1 (0.48) |
VIII | 1300 | 180-470-680 | 170-180-180-700 | 0 | 0 | 1 | 0 | 0 | 1 (0.48) |
IX | 1300 | 470-830 | 170-180-180-700 | 0 | 2 | 0 | 0 | 0 | 2 (0.96) |
X | 1350 | 180-450-720 | 170-180-180-750 | 7 | 4 | 0 | 0 | 0 | 11 (5.3) |
XI | 1350 | 180-450-720 | 170-180-180-700 | 0 | 6 | 38 | 0 | 0 | 44 (21.2) |
XII | 1400 | 450-950 | 180-180-180-850 | 2 | 6 | 0 | 1 | 37 | 46 (22.1) |
XIII | 1450 | 180-450-820 | 170-170-170-950 | 5 | 2 | 0 | 15 | 7 | 29 (13.9) |
XIV | 1450 | 180-450-820 | 170-170-170-170-775 | 2 | 1 | 0 | 0 | 0 | 3 (1.4) |
XV | 1200, 1350 | 180-470-550-720 | 170-180-180-750 | 0 | 0 | 6 | 0 | 0 | 6 (9.2) |
Total | 20 | 40 | 83 | 20 | 45 | 208 (100) |
C carrier, P patient, b bovine, Ch cheese, Pa pastry
aFragments < 50 bp are not shown