Key resources table.
Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
---|---|---|---|---|
Cell line (Drosophila melanogaster) | S2 | Drosophila Genome Resource Center | Stock #6 | |
Chemical compound | 4-thiouridine (4sU) | Sigma | T4509 | |
Software | Tophat 2.0.4 | Trapnell et al. (2009); PMID: 19289445 | ||
Software | Kallisto | Bray et al., 2016; PMID: 27043002 | ||
Software | MaxEntScan | Yeo and Burge, 2004; PMID: 15285897 | ||
Software | MEME | Bailey et al. (2009); PMID: 19458158 | ||
Software | STAR v2.5 | Dobin et al. (2013); PMID: 23104886 |