Table 2. Average quality metrics across all samples. Data expressed as means ± standard deviation.
Total reads | Percentage of reads mapped | Percentage of duplicates | Percentage of unique on target | Mean depth | |
---|---|---|---|---|---|
FFPE (n=83) | 8.8x106±3.1x106 | 96.1±3.9 | 60.2±13.7 | 45.9±3 | 698±365 |
FF and cell lines (n=49) | 7.9x106 ±3x106 | 97.3±2.5 | 36.1±9.7 | 42.7±2.4 | 899±347 |