. 2018 Jan 10;4(1):vex040. doi: 10.1093/ve/vex040

Table 1.

dN/dS ratio estimations and LRT comparisons between CpATV and closely related viruses.

Branch or subtree of interest	ORF
	Helicase	RdRp	Capsids	Capsids
	ORF1	ORF1	α and κ (shared estimation)	α and κ (separate estimation)
CpATV	0.004	0.003	0.10	ORF2 (κ): 0.10
CpATV	0.004	0.003	0.10	ORF4 (α): 0.08
New insect viruses	Clades 5, 6, 7, 8		All sequences with α and κ domains
New insect viruses	0.01	0.008	0.01	0.01
Closely-related infectious viruses	Nelorpivirus, Sandewavirus, Higrevirus, Cilevirus		Virgaviridae
Closely-related infectious viruses	0.004	0.006	0.02	0.02
p-value^a	0.93	0.56	0.40	0.95

^aLikelihood ratio test comparison with a null model assuming a common rate between the CpATV branch and branches of closely related infectious viruses and an alternative model assuming independent rates for CpATV and closely related infectious viruses. New insect viruses were excluded of the comparison.