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. Author manuscript; available in PMC: 2019 Jul 1.
Published in final edited form as: Theor Popul Biol. 2017 Jul 11;122:57–66. doi: 10.1016/j.tpb.2017.05.002

Table 2.

Root mean square error (RMSE) for the summed length of branches in a genealogy with 3, 5, or 7 descendants. The RMSE was calculated from the average value in 50,000 genealogies, independently realized 50 times, generated using either sampling from our equations with multiple random waiting times, labeled Topology Free, with expected waiting times, labeled Expected Times, or full coalescent simulations, labeled Coalescent. The expected theoretical values of the summed length of branches with sizes 3, 5, and 7 are 23, 25, and 27 respectively.

Branch Size

3 5 7

Sample Size Method RMSE (×10−3)

250 Topology Free 1.40 1.57 1.25
Coalescent 1.48 1.10 1.24
Expected Times 1.42 1.26 1.13

500 Topology Free 1.27 0.98 1.13
Coalescent 1.03 1.30 1.04
Expected Times 1.04 0.99 0.94

1000 Topology Free 0.73 0.98 0.83
Coalescent 0.99 0.87 0.70
Expected Times 0.79 0.83 0.74