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. 2018 Jan 12;8:618. doi: 10.1038/s41598-017-19128-6

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Axolotl Repeats. (a) Boxplot showing the difference in repeat lengths between those identified by RepeatMasker on either the BACs or VGW scaffolds, and those with coverage greater than 50×. (b) The length of repeats identified within the VGW scaffolds, separated by repeat class. Only repeat classes that were identified more than 500 times are shown. (c) The VGW output for ax_523994, this gene has the longest repeat identified of 5,695 bp. The repeats masked are shown in dark blue, the regions with coverage greater than 50 are shown in magenta. The coverage depth, up to a maximum of 100, is shown at the bottom. Contig breaks are shown by the grey bars.

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