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. 2017 Aug 16;31(2):167–179. doi: 10.5713/ajas.17.0224

Table 1.

Primer sequences, repeated motifs, fluorescent labeling and annealing temperatures of 21 microsatellite loci

Locus Primer sequence (5′ - 3′) Repeat motif Size (bp) Label Annealing Temp. (°C)
5A26216 F: AAGCTTCAGAAGGTGGCACT
R: CGTGCTGAGGGATTAAGGAA
(AC)18 104–122 FAM 58
5A26261 F: CTCATATGGGGCCAACAAAC
R: CCATCATGAAAGGGTGCTCT
(GT)11 146–157 FAM 58
5A5305-1 F: GGGGAGGAAGTATAGGTGTGC
R: AATCACACCTCTCCCACAGG
(TTTTTG)9 194–238 FAM 58
5A5111 F: GAGAAGAACGGTGGATGAGC
R: CCAGTGCTCTTTCCTTTTGC
(CA)9 246–267 FAM 58
5A26254 F: TGTGCCAATACCTCACTCCA
R: CATCCTCCCACCAGCATTAT
(TTTC)8(CT)23 134–174 VIC 58
5A266113 F: CATGGCAACCAAAACCACTT
R: GGCTTTGCTGTGCTACCTGT
(AC)11 190–213 VIC 58
5A265175 F: CGAATGTGACCAAAAGAACAG
R: CATGATTTGAGGGTCACCAA
(CA)16 217–240 VIC 58
5A5279 F: ATGAACCTGAATGGGAAGGA
R: ATGCTGATGCCAGTGTTCTG
(AAAAG)8(AAGAG)11(AAAAGAG)7 252–369 VIC 58
5A5397 F: TCAGAATACTGATTGCATTTGTCC
R: TGCTGCATAAAGACACGGAG
(ATTT)12 120–158 PET 58
5A265141 F: GTGGCATGCTTCACTCAGAA
R: AAGCATGCAAAACAGACCAA
(CT)6(GT)12 173–199 PET 58
5A26681 F: TAGGTGCTCCAATGAACTCAA
R: TGAGCTTGTTTGCTTGTTGG
(GAGAA)37 218–367 PET 58
5A265151 F: TGTATTTGGGGCAAATGTGA
R: TCCGGTCTGTAAAGTCAGACAA
(AG)10 157–180 NED 58
5A265164 F: TGCTGAAATGGTCAACATCC
R: TCTTCTATCTCCTCCCCCTGA
(TA)9 213–229 NED 58
5A26648 F: GGATTTATCTGTGGGATTTATCTGA
R: GTTGGTTTGGATTTGCTGCT
(GAGAA)20 245–376 NED 58
Ans13 F: GCTAAGGTTGTTGCATTGATC
R: TAGAGGCACAGACAAAGCAGA
(CA)9 127–161 FAM 53
Ans17 F: ACAAATAACTGGTTCTAAGCAC
R: AGAGGACTTCTATTCATAAATA
(TA)3 (CA)6C(CA)3(TA)3 111–140 FAM 53
Ans21 F: TTCAGCATAAGTTCAGGCATG
R: TATGGGTTAGTGTTCTTCTCA
(AT)2(GT)5(AT)2(GT)6 173–189 FAM 53
Aph19b F: ATGGAGCAAGCAATCGTCTG
R: AGCGTGAGGGTCTGCAGA
(CA)8 229–240 FAM 53
Aalμ1b F: CATGCGTGTTTAAGGGGTAT
R: TAAGACTTGCGTGAGGAATAG
(GT)15 66–90 VIC 53
Ans02 F: TTCTGTGCAGGGGCGAGTT
R: AGGGAACCGATCACGACATG
(AG)17 196–232 VIC 53
Ans25 F: CACTTATTAATGGCACTTGAAA
R: GTTCTCTTGTCACAACTGGA
(GT)18 251–269 VIC 53

FAM, 6-fluorescein amidite.