Table 1.
Reference sequences used for the alignments of the 8 HLA loci and their gene regions
| Locus | Reference gene | Reference exon | Number of exons | N Seqs |
|---|---|---|---|---|
| A | A*01:01:01:01 | A*01:01:01:01 | 8 | 174 |
| B | B*07:02:01 | B*07:02:01 | 7 | 166 |
| C | C*01:02:01 | C*01:02:01 | 8 | 166 |
| DRB1 | DRB1*01:01:01 | DRB1*01:01:01 | 6 | 160 |
| DQA1 | DQA1*01:01:02 | DQA1*01:01:01:01 | 4 | 158 |
| DQB1 | DQB1*02:01:01 | DQB1*05:03:01:01 | 6 | 154 |
| DPA1 | DPA1*01:03:01:01 | DPA1*01:03:01:01 | 4 | 102 |
| DPB1 | DPB1*02:01:02 | DPB1*01:01:01 | 5 | 166 |
N Seqs, number of consensus sequences retrieved after the filtering steps.