Table 2. MHC class II specific 16 mer B-cell linear epitopes with alleles, ABCpred score, antigenicity score and hydrophilicity score.
Sequence | MHC II HLA | ABCpred Score | Antigenicity (IEDB) | Hydrophilicity (IEDB) |
AELKCFGNTAVAKCNE | HLA-DRB1*07:01, HLA DRB1*01:01, HLA-DRB1*04:04, HLA-DQA1*05:01/DQB1*03:01 | 0.95 | 1.04 | 2.431 |
AEAQMSIQLINKAVNA | HLA-DRB4*01:01, HLA-DRB1*01:01, HLA-DRB1*04:04, HLA-DRB1*11:01 | 0.82 | 1.025 | 1.331 |
YKGVYELQTLELNMET | HLA-DRB1*01:01, HLA-DRB1*04:05, HLA-DPA1*02:01/DPB1*01:01, HLA-DPA1*03:01/DPB1*04:02 | 0.55 | 1.015 | 1.181 |