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Average B-Factors for Cy3 and Cy5 Fluorophores and Their Adjacent Terminal Basepairs
| Fluorophore or Basepair | Crystal Interface | Average B-Factor |
|---|---|---|
| Cy3 | RNA-protein | 78.0 |
| A58-U26 | RNA-protein | 45.4 |
| Cy5 | RNA-protein | 64.5 |
| G58-C26 | RNA-protein | 32.1 |
| Cy5 | RNA-RNA | 99.6 |
| G58-C26 | RNA-RNA | 48.7 |
Debye-Waller B-factors were calculated as B = 8π2 <u2>, where u is the mean atomic displacement.
