Table 1.
Sample | Metagenome shotgun sequence MSS | ResCap | Gain | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
N° reads | AbR | BacMet | Rel | Total | N° reads | AbR | BacMet | Rel | Total | ||
Bichat1 | 14,127,290 | 0.05% | 0.002% | 0.04% | 0.10% | 16,705,789 | 19% | 0.48% | 5.22% | 24.68% | 244.24 |
Bichat2 | 15,128,135 | 0.05% | 0.028% | 0.04% | 0.12% | 33,589,838 | 12% | 5.56% | 2.98% | 20.27% | 170.81 |
Bichat3 | 14,488,245 | 0.05% | 0.005% | 0.03% | 0.09% | 17,276,637 | 34% | 2.31% | 5.96% | 41.83% | 480.59 |
Bichat6 | 17,476,666 | 0.07% | 0.001% | 0.05% | 0.12% | 19,191,320 | 25% | 0.85% | 5.84% | 32.13% | 261.87 |
Bichat7 | 16,732,926 | 0.07% | 0.002% | 0.05% | 0.13% | 28,530,922 | 27% | 0.33% | 5.99% | 33.60% | 267.77 |
Bichat9 | 17,058,000 | 0.03% | 0.013% | 0.05% | 0.09% | 18,038,257 | 14% | 10.59% | 7.55% | 31.80% | 336.29 |
Bichat10 | 15,039,883 | 0.03% | 0.066% | 0.06% | 0.15% | 34,798,281 | 6% | 28.81% | 5.48% | 40.63% | 265.17 |
Bichat11 | 13,425,077 | 0.03% | 0.091% | 0.06% | 0.18% | 35,901,508 | 5% | 26.73% | 4.72% | 35.98% | 201.67 |
Bichat13 | 17,903,872 | 0.05% | 0.023% | 0.06% | 0.14% | 26,283,052 | 16% | 13.27% | 7.39% | 36.85% | 270.02 |
F266 | 19,557,955 | 0.06% | 0.005% | 0.02% | 0.08% | 14,024,345 | 21% | 4.62% | 2.57% | 28.23% | 337.50 |
PIG20 | 27,375,311 | 0.08% | 0.028% | 0.01% | 0.12% | 22,485,364 | 18% | 16.20% | 1.81% | 36.38% | 298.23 |
PIG26 | 13,831,057 | 0.07% | 0.005% | 0.02% | 0.10% | 15,756,070 | 19% | 3.88% | 2.73% | 25.93% | 271.20 |
PIG29 | 18,945,765 | 0.09% | 0.018% | 0.02% | 0.12% | 26,223,850 | 18% | 10.26% | 2.52% | 30.65% | 248.31 |
PIG31 | 12,778,294 | 0.07% | 0.010% | 0.02% | 0.09% | 18,055,019 | 13% | 5.76% | 2.08% | 20.77% | 219.12 |
PIG528 | 19,689,471 | 0.06% | 0.003% | 0.02% | 0.08% | 13,864,257 | 21% | 2.70% | 3.11% | 26.83% | 323.23 |
PIG94 | 15,985,219 | 0.07% | 0.004% | 0.02% | 0.10 | 15,351,408 | 18% | 2.57% | 3.31% | 24.05% | 240.20 |
PIG96 | 9,290,402 | 0.06% | 0.001% | 0.01% | 0.07% | 12,225,935 | 21% | 1.13% | 1.67% | 23.84% | 320.90 |