Appendix 1—table 2. Correspondence between BPPS and SFLD subgroups for haloacid dehalogenases*.
Subgroup IDs | SFLD& | SFLD# | ||
---|---|---|---|---|
BPPS | SFLD‡ | BPPS§ | Total | % |
root† | various | 1531 | 1618 | 96.2 |
1138 | 82 | 833 | 9.8 | |
34 | 0 | 200 | 21768 | 0.9 |
1129 | 3 | 129 | 2.3 | |
23 | 0 | 101 | 21768 | 0.5 |
1124 | 1 | 495 | 0.2 | |
1135 | 125 | 9423 | 1.3 | |
21 | 0 | 158 | 21768 | 0.7 |
1124 | 91 | 495 | 18.4 | |
1145 | 2 | 43 | 4.7 | |
20 | 0 | 46 | 21768 | 0.2 |
1131 | 162 | 201 | 80.6 | |
25 | 0 | 76 | 21768 | 0.3 |
1135 | 311 | 9423 | 3.3 | |
2 | 0 | 1915 | 21768 | 8.8 |
2 | 10091 | 11846 | 85.2 | |
3 | 0 | 937 | 21768 | 4.3 |
1129 | 4 | 129 | 3.1 | |
1134 | 1 | 866 | 0.1 | |
1135 | 4500 | 9423 | 47.8 | |
1139 | 4 | 1851 | 0.2 | |
1140 | 1 | 821 | 0.1 | |
4 | 0 | 2422 | 21768 | 11.1 |
2 | 1 | 11846 | 0.0 | |
1137 | 9 | 1430 | 0.6 | |
1140 | 3 | 821 | 0.4 | |
1141 | 53 | 278 | 19.1 | |
1142 | 2 | 236 | 0.8 | |
1144 | 2497 | 2759 | 90.5 | |
5 | 0 | 229 | 21768 | 1.1 |
2 | 986 | 11846 | 8.3 | |
6 | 0 | 342 | 21768 | 1.6 |
1124 | 360 | 495 | 72.7 | |
7 | 0 | 330 | 21768 | 1.5 |
1134 | 628 | 866 | 72.5 | |
33 | 0 | 100 | 21768 | 0.5 |
1134 | 153 | 866 | 17.7 | |
8 | 0 | 57 | 21768 | 0.3 |
1133 | 400 | 400 | 100 | |
32 | 0 | 32 | 21768 | 0.1 |
1139 | 218 | 1851 | 11.8 | |
31 | 0 | 28 | 21768 | 0.1 |
1139 | 216 | 1851 | 11.7 | |
9 | 0 | 195 | 21768 | 0.9 |
1134 | 1 | 866 | 0.1 | |
1139 | 942 | 1851 | 50.9 | |
10 | 0 | 105 | 21768 | 0.5 |
1137 | 896 | 1430 | 62.7 | |
11 | 0 | 284 | 21768 | 1.3 |
1135 | 3 | 9423 | 0.0 | |
12 | 0 | 478 | 21768 | 2.2 |
1136 | 1 | 246 | 0.4 | |
1137 | 178 | 1430 | 12.4 | |
13 | 0 | 117 | 21768 | 0.5 |
1138 | 751 | 833 | 90.2 | |
14 | 0 | 1034 | 21768 | 4.8 |
1135 | 32 | 9423 | 0.3 | |
15 | 0 | 525 | 21768 | 2.4 |
1129 | 11 | 129 | 8.5 | |
1130 | 809 | 836 | 96.8 | |
1132 | 6 | 227 | 2.6 | |
1135 | 63 | 9423 | 0.7 | |
1139 | 3 | 1851 | 0.2 | |
16 | 0 | 337 | 21768 | 1.5 |
1135 | 1 | 9423 | 0.0 | |
1140 | 670 | 821 | 81.6 | |
17 | 0 | 230 | 21768 | 1.1 |
1135 | 288 | 9423 | 3.1 | |
18 | 0 | 505 | 21768 | 2.3 |
1135 | 950 | 9423 | 10.1 | |
19 | 0 | 197 | 21768 | 0.9 |
1129 | 3 | 129 | 2.3 | |
22 | 0 | 338 | 21768 | 1.6 |
24 | 0 | 110 | 21768 | 0.5 |
1135 | 107 | 9423 | 1.1 |
*Erroneous, ambiguous and corrected classifications are shown as italicized, underlined, and bold, respectively.
†Averages over 12 root-assigned subgroups.
‡SFLD subgroups represented in each BPPS subgroup; zero indicates the SFLD unannotated sequence set.
§The number of sequences in both the SFLD and BPPS subgroups in each row.
#Total number of sequences in each SFLD subgroup and the percentage of these in the BPPS subgroup.