Table 2.
Novel miRNAs in mulberry phloem saps by Illumina sequencing.
| MiRNA-name | Sequence (5′-3′) | Precursor sequence (5′-3′) | Energy (kcal mol-1) |
|---|---|---|---|
| mul-miRn21-3p | GAGCAGUGCGGAGUAGCUGAG | GGUUCCGGCUGUUGCGUUGGAACUGAAUGUCUUAUUUAUUCACUUCAUCAUUUAUUUAUUUAACGCUUUCUUAUUUAUUUAUAAAGUUAUUUCAAAUUAUAUCCUACUGGACCUUUUACUCACGUUUUAUUGUUUUAAAAAUGUUAACCCCUCUCUUGAGACUCUAAGAGCAGUGCGGAGUAGCUGAGUUG | −33.60 |
| mul-miRn22-5p | CAGCGAACUAAACGGGCCCU | AUCAGCGAACUAAACGGGCCCUUAAACUUUCGUUUUUUCACCUCAUCAUUCUGUACUUGUUAACUUCUGUAGAAAUCUUAAAAAAUUCAAUUAAACACUCAUUUUGUCCCCACUCAGAGCUGAUAAUUUAAAAGUUUAAAAAUUCUAGCCAUACUCACUUAGGGCGUGUUUGGUUCGGGGGA | −35.84 |
| mul-miRn23-5p | UGAGGAUGUAUCAGAAGAUAG | AAAGGGUCCCUGAGGAUGUAUCAGAAGAUAGUGCAGAUAUUUGGUUUUGAUAGGCAUUCUUGUUCUGGAGUAUGCUUUUGCUUAUCCUUCCCCCACUACAUUCGCAUUGCUGGAUCUGCUUGAGGAAACUAAAACCAACAAUAAUUUUAGUUAAAGUAUUCUGCUGUUGUGGAAUAUUGGUUGACACAUGAGAUAUCUCCCUUUCUUUCACCGUCAAAGGCAGAACUCUCUUGUUCCCACUUUCCUCUAACACUUCAGCUCCAGCUGUAGAAGAGAAAGUAUCUCGCUUAGCCACACCAAUGUAUUUUGACUUGCCUCUGACAGAGGUGUUUUUGAUAGCAUCUCUCAAAACAUACAUUUUAGUGGUAUUCC | −95.65 |
| mul-miRn24-5p | AAGCUAGCUGUGUGGAUGAUA | UAUGCAACAAAAGCUAGCUGUGUGGAUGAUAUUAAUUGUCGUUUUAGCGGCAGCGUGUUUCGUUGUCGC | −21.80 |
| mul-miRn25-3p | UUCCAAAUCCACCCAUGCCCAC | UUUGAGCUUUAUGAAGUUGUCGGGCCUGGGAGGUUUGGUAGGAGUAAUAAGUAAUUACCAUUUAGUUUUUUGUUCACUUAAUUGAUAUUAUAAUUGUAUGUUUUAAUUUAGUUCUCCUUCCAAAUCCACCCAUGCCCACAAUUUCCUCAGGCUUCUCUC | −51.80 |
| mul-miRn26-5p | GCUUCCUCGGAGACGGCGCACG | AGAAUAACAACAAAUCGGCAGCUUCCUCGGAGACGGCGCACGACAGCAAGAAGGGUGGGUCGUCCUCGGGAAGCGGAGAGCAGGCGGCGGCGCCG | −37.00 |
| mul-miRn27-5p | CAGACAUUGAGUGGGGGAGG | UGAUAUUUUCAGCCUGUAAUCAGACAUUGAGUGGGGGAGGAAGAGAAGAUCUCGUUACCGGCGGGUCGACCCGGAUAAACCGCUGGAAAAUGACGGUUUUGUUCCUUGCCACGCGGCGGCCGGCGAUCGGUGCCAGCCAUGGUAGCCGCGGUCUCAUCUCUCUCCCGCGCUUUGUCUGAGAAACGGCCAGUCUGAGCCC | −82.7 |
| mul-miRn28-3p | GGACUUUAUGGACCCGUCGGUG | CGGGCAAUGCUGUGAACGGUCAGAUCCCGCCGGCCGACCGGUCUGUGAGUCCUUUGUUACCGGACUUUAUGGACCCGUCGGUGUGCUAUGUCC | −37.9 |
| mul-miRn29-5p | GUGGAUCAAGAACUGGAGGC | UUUGCAACAUGUGGAUCAAGAACUGGAGGCAAAGGUUACUGCUUCAUUUGCACCACAGAGAUCUCAAGUGGCACAACCUCCUGCAACCAAAGGUUCUUAUUCACAGGUUGGAUU | −35.1 |
| mul-miRn30-3p | UCCAGAAGCAAUCGUACGGGA | CGUGGAGCACCCUGUUCCUGUAGUUGCUCCUGGAUCUGCUAAGAAUCUCUCUGAAGUCAAAAUUAAUCCAGAAGCAAUCGUACGGGAAGGACACACU | −27.9 |
| mul-miRn31-3p | AUGCACUGCCUCUUCCCUGGC | AGAGGGGGUCAAAAAGCAGAAUAAGGCAGGGAACGGACAGAGCAUGGAUGGAGCCUUCAACAGAAGAAGGAAUGCUGUUGUGGCUCUACUCAUGCACUGCCUCUUCCCUGGCUGUGCCUCUC | −56.7 |
| mul-miRn32-5p | GGAAUGUUGUCUGGCUCGAGG | AAUCCCGCUAAGAAGUCUUUGUUUAAGAGCUAUAGACUAUAAAGUAAGGGAAUGGGACCCCGACGGGAAUGUAUCCCAAGCAGCGGAGUAAGUUCACUCUUUGGUAAGCUUAGGCGCCUAAAUGUCUGAGUUCGGAAAGCAGAGUAAGCGGCGAUC | −45.0 |
| mul-miRn33-3p | GGGAGAAAGAGGAAAAUAGGC | UUUGUUUUUGUUUUUUUUUUUAAUAUCACAAGAUUCACAAGUCACAACCCUGCUUGUUAGAGCACAGACACAAGCAACUGUAGGUGGACUAAGUAGCCAUGGGCCAGGCUGAGAGCGGUAUCAUGAGGCCUCGCAGAGUAGCUUCAAUGCAUUGGAUGCAUUUCCAACGUAAAAAAUUUCACUUUUAAGCGUGUAAUUUUUAAAUAAUUUUUAAGAAUUUUUUUGGGAGAAAGAGGAAAAUAGGC | −55.6 |
| mul-miRn34-5p | GGGAGCUGAGUUGAUGAGCA | GGACUGCUAAACAAGCUCGUCUCUCGCUCCCUCUCCGUCGCUGGAAAAUGGCAGCAGCAACAGCUCCGCCGUCUUAACAUCCAUGAAUAUCAGGGAGCUGAGUUGAUGAGCAAAUGUGGGAU | −43.6 |
| mul-miRn35-5p | GCAGAAGAGUCAGAGCUUUGA | AGGUAGUUUUGCAGAAGAGUCAGAGCUUUGAUUUGAAUCUCAGAAAAAAUAAAAACCGAGAAAGAAAAAAGAAAUGGCGAGCCCGAAAUCCGGCAGCCAAAACGACGGCGUUCCGUGCGACUUCUGCAGCGAGCAAACGGCGGUGCUGUACUGCAGAGCCGACUCGGCGAAGCUCUGCCUCUUCUGCGACCAGCACGUCCA | −75.2 |
| mul-miRn36-3p | GCUGAAGCUGGGGUGGGGCC | GCGGCGGCUCUGGUGCUCCACACCUUCUUCAGCUGGCUGCUGAUGCUGAAGCUGGGGUGGGGCCUUGCCGGCGG | −41 |
| mul-miRn37-3p | GGACGGCAUCGAUCGGAGCUC | CGGCGAGGGAGCUCCGACCGAAGCUUCCUCUUGGCGAUGGACGGCAUCGAUCGGAGCUCUUGCUUCGCU | −37.2 |
| mul-miRn38-3p | GACUGAAAGCGGACCUGGUGGUG | GAAGAUUUGUAUUUGGCCGCCAGGUCCACCUUCAGUCUUCUUCAAAGACCUUCGUUGCUGCCACACAGCCAGCUUUGGUUUCAAGGACUGAAAGCGGACCUGGUGGUGAUAAUUCAAA | −49.5 |
| mul-miRn39-5p | UCGACCAGCCGAGUAGAAGUA | AUAUUGGAUCUCGACCAGCCGAGUAGAAGUAAGUAUCUCAUUUCCCUCGAUUGUUACUUCUACUCGGCUGGUAGAGAUUCAAUGUU | −50.6 |