Skip to main content
. 2017 Dec 19;113(12):2609–2620. doi: 10.1016/j.bpj.2017.10.026

Table 1.

Summary of Hydrodynamic Parameters

Parameters HMGA2
RF
HMGA2-RF Complex
Experimental Analysis Experimental Analysis HYDROPRO DAMMIN Experimental Analysis HYDROPRO DAMMIN HYDROPRO MONSA
Rh (nm)a 2.58 ± 0.25 4.12 ± 0.24 4.06 ± 0.05 4.65 ± 0.15 4.57 ± 0.04 4.37 ± 0.10
Rg (nm)b 2.45 ± 0.06 4.54 ± 0.14 4.51 ± 0.12 4.85 ± 0.06 4.88 ± 0.07 4.77 ± 0.01
Dmax (nm)b 8.0 15.4 15.7 ± 0.27 15.0 15.3 ± 0.12 15.0 ± 0.20
s020,w (S)c 1.12 ± 0.12 3.86 ± 0.12 4.03 ± 0.05 4.06 ± 0.11 4.11 ± 0.05 4.31 ± 0.10
Mwd 11.70 41.40 53.10
Mwe 11.80 43.03 55.47
Chif 1.2h 1.0h
1.2, 1.2, 1i
NSDg 0.73 ± 0.08h 0.83 ± 0.03h
0.87 ± 0.06i
a

Experimentally measured using DLS with errors obtained from linear regression analysis.

b

Experimentally measured using GNOM analysis from SAXS data.

c

Experimentally measured using AUC.

d

Calculated from amino acid/nucleotide sequence.

e

Calculated from Rh and s020,w.

f

Goodness-of-fit parameter suggesting agreement between raw data and data back-calculated from the ab initio model.

g

Normalized spatial discrepancy indicating agreement between individual models.

h

Data from DAMMIN.

i

Data from MONSA.