Table 4.
Interaction profile between PS and ATP in wild-type and alanine mutants after MD simulations.
| Systems | No. of hydrogen bond | Participating residues in hydrogen bond with their bond length (Å) | Participating residues in hydrophobic bonding |
|---|---|---|---|
| Wild-type | 16 | Arg44(2.7 Å), Arg47(2.7 Å, 2.9 Å), Gly158(2.7 Å,), Lys160(2.5 Å, 2.9 Å), Val187(3.0 Å, 3.0 Å), Met195(2.9 Å), Ser196(2.7 Å), Ser197(3.1 Å, 2.8 Å, 2.6 Å), Arg198(2.8 Å, 2.7 Å, 2.5 Å) | Gly46, Leu50, Phe157, Pro185, Thr186 |
| H44A | 13 | Arg47(2.6 Å), Lys160(2.5 Å, 3.0 Å), Asp161(2.5 Å), Val187(2.9 Å, 2.9 Å), Met195(2.9 Å), Ser196(2.7 Å), Ser197(2.9 Å, 3.0 Å), Arg198(3.2 Å, 2.6 Å, 2.5 Å) | Gly46, Phe157, Gly158, Pro185, Thr186 |
| H47A | 9 | Arg44(2.8 Å), Gly158(2.9 Å,), Lys160(2.7 Å), Val187(2.9 Å, 3.1 Å), Met195(2.9 Å), Ser196(2.6 Å), Arg198(2.6 Å, 2.5 Å) | Gly46, His47, Leu50, Phe157, Pro185, Thr186 |
| N69A | 12 | Arg44(2.6 Å), Lys160(2.9 Å, 2.6 Å, 2.9 Å), Val187(3.0 Å, 3.0 Å), Met195(3.0 Å), Ser196(2.6 Å), Ser197(2.7 Å), Arg198(2.8 Å, 2.6 Å, 2.5 Å) | Met40, Gly46, His47, Leu50, Phe157, Gly158, Thr186 |
| Q72A | 16 | Arg44(2.7 Å), Arg47(2.6 Å), Gly158(3.0 Å), Lys160(2.5 Å, 2.9 Å), Asp161(2.9 Å),Val187(2.9 Å, 2.8 Å), Met195(3.0 Å), Ser196(2.6 Å), Ser197(2.9 Å, 2.9 Å, 3.1 Å), Arg198(2.7 Å, 2.7 Å, 3.1 Å) | His44, Leu50, Phe157, Pro185, Thr186 |
| K160A | 9 | Arg44(2.6 Å), Val187(2.9 Å), Met195(2.8 Å, 3.3 Å), Ser197(3.2 Å, 2.8 Å), Arg198(2.9 Å, 2.9 Å, 2.9 Å) | Gly46, His47, Leu50, Phe157, Ala160, Pro185, Thr186 |
| Q164A | 15 | Arg44(2.6 Å), Gly158(2.9 Å, 3.3 Å), Lys160(2.5 Å, 2.8 Å), Asp161(3.2 Å) Val187(2.9 Å, 2.7 Å), Met195(3.0 Å), Ser196(2.6 Å), Ser197(2.8 Å, 3.1 Å), Arg198(2.5 Å, 2.6 Å, 3.0 Å) | Met40, His47, Leu50, Phe157, Pro185, Thr186 |