Skip to main content
. Author manuscript; available in PMC: 2019 Jan 1.
Published in final edited form as: Math Models Methods Appl Sci. 2017 Nov 24;28(1):61–93. doi: 10.1142/S0218202518500021

Table 4.

Reaction and parameter definitions. Concentrations and the Michaelis-Menten constants (K) are given in [nM]. First- and second-order rates are given in [s−1] and [nM−1s−1], respectively, and V are given in [nMs−1]. (Extracted from42.)

Reaction Equation Kinetic parameters Ref.
υ1 k1X1X2k−1X3 k1 = 0.003 k−1 = 0.06 24
υ2 k2X3X3k−2X4 k2 = 0.01 k−2 = 0.1 24
υ3 k3X4k−3X5 k3 = 1 k−3 = 0.01 24
υ4 V4X5/(K4+ X5) V4 = 450 K4 = 50 24
υ5 k5X5X6k−5X7 k5 = 0.06 k−5 = 0.2 24
υ6 k6X7k−6X8 k6 = 1 k−6 = 0.05 24
υ7 k7X8k−7X5X9 k7 = 0.3 k−7 = 0.006 24
υ8 V8X9/(K8+ X9) V8 = 1 K8 = 100 24
υ9 k9X9k−9X10 k9 = 1 k−9 = 0.03 24
υ10 k10X9X11k−10X12 k10 = 0.214 k−10 = 5.25 42
υ11 V11X12X13/(K11+ X13) V11 = 4 K11 = 64 42
υ12 V12X14X15/[K12(1 + X16/K14) + X15] V12 = 3.5 K12 = 317 42
υ13 V13X16/[K13(1 + X17/K15) + X16] V13 = 0.058 K13 = 2200 38
υ14 V14X14X16/[K14(1 + X15/K12) + X16] V14 = 2.9 K14 = 317 38
υ15 V15X17/[K15(1 + X16/K13) + X17] V15 = 0.058 K15 = 60 38
υ16 V16X17X18/[K16(1 + X19/K18) + X18] V16 = 9.5 K16 = 1.46105 38
υ17 V17X19/[K17(1 + X20/K19) + X19] V17 = 0.3 K17 = 160 38
υ18 V18X17X19/[K18(1 + X18/K16) + X19] V18 = 16 K18 = 1.46105 38
υ19 V19X20/[K19(1 + X19/K17) + X20] V19 = 0.27 K19 = 60 38