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. 2018 Jan 18;10:2. doi: 10.1186/s13321-017-0253-8

Table 2.

Summary of pharmacophore, fingerprint, and QSAR models parameters

Pharmacophore Fingerprint Index QSAR coefficient
Type Amino acid Liganda Steroid Generalized
Hydrogen bond Ala306 Any donor FP1 0.296 0.229
Hydrogen bond Asp309 Any acceptor FP2 0.679 0.621
Hydrogen bond Thr310 Any acceptor FP3 0.791 0.710
Hydrogen bond Met374 Keto or ether oxygen FP4 0.823 0.821
Hydrogen bond Met374 Nitrile nitrogen FP5 NA 1.278
Hydrogen bond Met374 Narc nitrogen FP6 NA 2.237
Heme–iron interaction Heme–iron 19-OH, 19 = O, C19 FP7 0.721 0.724
Coordination Heme–iron Narc FP8 NA 38.587Δf(r)S + 3.931
log PC Hydrophobic residues Hydrophobic surface FP9 2.234 1.969
Intercept NAb NA NA 0.270 0.755

aNitro group was excluded

bNot applicable

cAromatic azaheterocycle