Table 3.
Ten predicted protein complexes with smallest P-values
| Index | P-value | Predicted protein complexes | Gene ontology term | Cluster frequency |
|---|---|---|---|---|
| 2 | 1.21e-31 | YCR035C, YDL111C, YDR280W, YGR095C | polyadenylation-dependent | 12 out of 14 |
| YHR069C, YHR081W, YNL189W, YNL232W | snoRNA 3’-end processing | genes, 85.7% | ||
| YOR001W, YOR076C, YGR158C, YGR195W | ||||
| YOL021C, YOL142W | ||||
| 5 | 8.98e-31 | YAL043C, YDR195W, YDR228C, YDR301W | mRNA polyadenylation | 13 out of 17 |
| YJL033W, YJR093C, YKL018W, YKL059C | genes, 76.5% | |||
| YLR277C, YMR061W, YNL317W, YOR179C | ||||
| YKR002W, YLR115W, YER133W, YGR156W | ||||
| YPR107C | ||||
| 7 | 5.85e-32 | YBR146W, YBR251W, YDR036C, YDR041W | organellar small ribosomal | 14 out of 15 |
| YGL129C, YGR084C, YHL004W, YIL093C | subunit | genes, 93.3% | ||
| YNL137C, YNL306W, YPL118W, YDR347W | ||||
| YJR113C, YKL155C, YDR337W | ||||
| 10 | 3.70-43 | YBR217W, YBR272C, YDL007W, YDL097C | proteasome complex | 20 out of 21 |
| YDR427W, YEL037C, YER012W, YER021W | genes, 95.2% | |||
| YFR052W, YGL004C, YGL048C, YHL030W | ||||
| YOR259C, YOR261C, YPR108W, YHR200W | ||||
| YFR004W, YFR010W, YDL147W, YDR394W | ||||
| YKL145W | ||||
| 13 | 1.65e-35 | YBR119W, YDL087C, YDR235W, YDR240C | U1 snRNP | 14 out of 16 |
| YHR086W, YIL061C, YKL012W, YLR147C | genes, 87.5% | |||
| YML046W, YMR125W, YPL178W, YPR182W | ||||
| YLR275W, YLR298C, YFL017W-A, YGR013W | ||||
| 18 | 4.7e-29 | YBR254C, YDR108W, YDR246W, YDR407C | TRAPP complex | 10 out of 11 |
| YGR166W, YJL044C, YKR068C, YML077W | genes, 90.9% | |||
| YMR218C, YOR115C, YDR472W | ||||
| 27 | 7.34e-36 | YBR055C, YBR152W, YDL098C, YDR473C | U4/U6 x U5 tri-snRNP | 15 out of 15 |
| YJR022W, YKL173W, YLR147C, YLR275W | complex | genes, 100% | ||
| YPR082C, YPR178W, YPR182W, YFL017W-A | ||||
| YGR091W, YOR159C, YOR308C | ||||
| 35 | 2.05e-30 | YBL084C, YDL008W, YDR118W, YFR036W | anaphase-promoting | 11 out of 11 |
| YHR166C, YKL022C, YLR102C, YLR127C | complex | genes, 100% | ||
| YNL172W, YOR249C, YGL240W | ||||
| 46 | 9.34e-32 | YBL093C, YBR193C, YBR253W, YCR081W | transcription factor activity, | 16 out of 17 |
| YDR443C, YER022W, YGL025C, YGR104C | RNA polymerase II | genes, 94.1% | ||
| YNL236W, YNR010W, YOL051W, YOL135C | transcription factor | |||
| YHR041C, YHR058C, YDL005C, YDR308C | binding | |||
| YOR174W | ||||
| 399 | 2.77e-28 | YBR127C, YDL185W, YEL051W, YGR020C | proton-transporting ATPase | 11 out of 11 |
| YKL080W, YLR447C, YMR054W, YOR270C | activity, rotational mechanism | genes, 100% | ||
| YOR332W, YPR036W, YHR039C-A |