Table 7:
Summary statistics of ab initio, RNA-seq-based, and homology-based gene prediction results
| Evidence type | Programs | Element | Total count | Exon/gene | Total length, bp | Mean length, bp |
|---|---|---|---|---|---|---|
| Gene | 14 576 | 142 415 318 | 9770.53 | |||
| Augustus | 4.85 | |||||
| Exon | 70 733 | 14 736 668 | 208.34 | |||
| Gene | 10 946 | 46 119 402 | 4213.35 | |||
| ab_initio | Geneid | 2.25 | ||||
| Exon | 24 686 | 3 925 563 | 159.01 | |||
| Gene | 27 754 | 273 745 951 | 9863.29 | |||
| GeneMarks-ET | 5.50 | |||||
| Exon | 152 660 | 30 847 503 | 202.06 | |||
| Gene | 36 213 | 840 429 061 | 23 207.94 | |||
| RNA-seq | Cufflinks Transdecoder | 7.03 | ||||
| Exon | 254 770 | 201 721 675 | 791.77 | |||
| Known gene (NCBI lepidoptera) | PASA (gmap) | 44 561 | 22 484 151 | 504.57 |