Table 2.
CSC-repressed genes
GenBank | Symbol | Gene name | Gene function | Average fold change (decrease)
|
|||
---|---|---|---|---|---|---|---|
NHEK | Leuk1 | Leuk2 | 101A | ||||
BC005961 | PTHLH | Parathyroid hormone-like hormone | Cell–cell signaling, cell proliferation | 4.29 | 1.01 | 1.55 | 7.04 |
U41815 | NUP98 | Nucleoporin 98 kDa | Intracellular protein transport | 3.34 | 1.68 | 1.11 | 3.62 |
NM 023007 | FLJ12517 | Hypothetical protein FLJ12517 | Unknown | 3.13 | 1.76 | 1.59 | 1.85 |
NM 024098 | MGC2574 | Hypothetical protein MGC2574 | Regulation of transcription | 2.82 | 1.07 | 1.12 | 2.60 |
NM 006795 | EHD1 | EH-domain containing 1 | Unknown | 2.15 | 1.01 | 1.60 | 2.39 |
NM 003017 | SFRS3 | Splicing factor, arginine/serine-rich 3 | Regulation of transcription | 2.03 | 1.21 | 1.58 | 1.86 |
AF109294 | MTAP | Methylthioadenosine phosphorylase | Regulation of transcription | 1.87 | 1.39 | 2.22 | 1.42 |
NM 003457 | ZNF207 | Zinc finger protein 207 | Regulation of transcription | 1.69 | 1.02 | 1.49 | 2.83 |
The list includes eight genes down-regulated (≥2-fold; p < 0.005) in CSC-treated (25 μg/ml, 24 h) vs. untreated cells in any one of the cell lines NHEK, Leuk1, Leuk2 and 101A. Assignments of gene functions to biological processes were extracted using PathwayAssist datamining software. Fold changes are derived from the averages of two independent microarray experiments.