Table 1. Description of the top ten most abundant superfamilies found in the assignation of structure of the sequences with at least one peptide.
| Percentage of proteins with assigned fold | CATH | Representative domain in CATH | C | A | T | Representative protein |
|---|---|---|---|---|---|---|
| 33.60 | 3.30.70.150 | 1wddA01 | Alpha Beta | 2-Layer sandwich | Alpha-Beta plaits | Large subunit rubisco |
| 27.47 | 1.10.287.210 | 1qbzA00 | Mainly Alpha | Orthogonal bundle | Helix hairpins | Envelope glycoprotein gp160 |
| 21.30 | 2.170.40.20 | 1kmoA02 | Mainly Beta | Beta barrel | Maltoporin; chain A | HIV envelope protein Gp120; chain G |
| 5.14 | 3.30.420.40 | 3i33A01 | Alpha Beta | 2-Layer Sandwich | Nucleotidyl transferase; domain 5 | Plasmodium falciparum actin I |
| 1.52 | 1.10.490.10 | 2nrlA00 | Mainly Alpha | Orthogonal Bundle | Globin-like | Blackfin tuna myoglobin |
| 1.67 | 2.30.36.70 | 1s22A02 | Mainly Beta | Roll | Actin; chain A, domain 2 | Actin; chain A, domain 3 |
| 0.55 | 3.40.190.10 | 1ixhA01 | Alpha Beta | 3-Layer(aba) Sandwich | D-maltodextrin binding protein; domain 2 | Periplasmic binding protein-like II |
| 0.54 | 2.60.40.720 | 2ioiA00 | Mainly Beta | Sandwich | Immunoglobulin-like | Human mutant, p53 |
| 0.53 | 3.40.50.720 | 1c0pA01 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like domain |
| 0.42 | 2.60.120.10 | 1juhA02 | Mainly Beta | Sandwich | Jelly rolls | Jelly rolls |