Table 5.
Simple sequence repeats (SSRs) in the eight Fritillaria cp genomes.
| Species | SSR loci no. | PolyM. loci no. | PolyM. loci (100%) | mono- | di- | tri- | tetra- | penta- | Location | Region | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IGS | Intron | CDS | LSC | IR | SSC | |||||||||
| F. cirrhosa | 74 | 62 | 83.78% | 53 | 13 | 2 | 6 | 0 | 46 | 13 | 15 | 57 | 4 | 13 |
| F. eduardii | 60 | 48 | 80.00% | 39 | 12 | 1 | 8 | 0 | 35 | 11 | 14 | 42 | 4 | 14 |
| F. hupehensis | 85 | 73 | 85.88% | 58 | 15 | 2 | 8 | 2 | 53 | 18 | 14 | 63 | 6 | 16 |
| F. karelinii | 61 | 49 | 80.33% | 40 | 11 | 1 | 9 | 0 | 34 | 14 | 13 | 44 | 4 | 13 |
| F. meleagroides | 82 | 70 | 85.37% | 55 | 16 | 2 | 8 | 1 | 50 | 17 | 15 | 63 | 6 | 13 |
| F. persica | 62 | 50 | 80.65% | 40 | 10 | 3 | 9 | 0 | 34 | 12 | 16 | 42 | 4 | 16 |
| F. taipaiensis | 78 | 66 | 84.62% | 54 | 14 | 2 | 7 | 1 | 47 | 17 | 14 | 58 | 4 | 16 |
| F. unibracteata var. wabuensis | 74 | 62 | 83.78% | 54 | 12 | 1 | 7 | 0 | 45 | 15 | 14 | 55 | 4 | 15 |
| Total Loci | 136 | 124 | 91.18% | 89 | 24 | 6 | 12 | 5 | 92 | 24 | 20 | 103 | 6 | 27 |