Table 1.

Comparison C. reinhardtii chloroplast genome versions

	BK000554.2 (GB 2002)	FJ423446.1 (GB 2009)	cv11 (this work)	CPv4 (this work)
size, bp	203,828	204,159	205,713	205,535
error frequency per 1 kbp
mean ± stdev, %	0.497 ± 0.525	0.168 ± 0.151	0.139 ± 0.069	0.136 ± 0.059
maximum, %	2.985	1.419	0.624	0.357
minimum, %	0.085	0.080	0.079	0.080
coverage depth
mean ± stdev, count	16,648 ± 3,825	16,582 ± 3,758	16,711 ± 3,599	17,839 ± 1,993
maximum, count	48,588	60,589	34,989	29,049
minimum, count	0	0	16	1,345
inferred insert size
mean ± stdev, bp	364 ± 77	365 ± 70	360 ± 32	360 ± 27
> mean + 2 × stdev, %	0.87	0.92	0.29	0.27
< mean − 2 × stdev, %	2.75	1.24	0.59	0.48