Table I.
Gene | rs# | PCR condition | Primer sequence (5′-3′) | R/E | ||
---|---|---|---|---|---|---|
VEGF −2578C>A | rs699947 | 94°C | 5 min | 35 cycles | F: GGATGGGGCTGACTAGGTAAG | AvaII |
94°C | 30 sec | R: AGCCCCCTTTTCCTCCAAC | ||||
−62°C | 30 sec | |||||
−72°C | 30 sec | |||||
72°C | 7 min | |||||
VEGF −1154G>A | rs1570360 | 94°C | 5 min | 38 cycles | F: CGCGTGTCTCTGGACAGAGTTTCC | MnlI |
94°C | 30 sec | R: CGGGGACAGGCGAGCTTCAG | ||||
−59°C | 40 sec | |||||
−72°C | 30 sec | |||||
72°C | 5 min | |||||
VEGF −634C>G | rs2010963 | 94°C | 5 min | 40 cycles | F: CAGGTCACTCACTTTGCCCCGGTC | AvaII |
94°C | 30 sec | R: GCTTGCCATTCCCCACTTGAATCG | ||||
−63°C | 35 sec | |||||
−72°C | 30 sec | |||||
72°C | 7 min | |||||
VEGF 936C>T | rs3025039 | 94°C | 5 min | 35 cycles | F: AAGGAAGAGGAGACTCTGCGCAGAGC | NlaIII |
94°C | 30 sec | R: TAAATGTATGTATGTGGGTGGGTGTGTCTACAGG | ||||
−68°C | 1 min | |||||
−72°C | 30 sec | |||||
72°C | 7 min |
PCR, polymerase chain reaction; rs#, RefSNP(rs) number; R/E, restriction enzyme; VEGF, vascular endothelial growth factor; F, forward primer; R, reverse primer.