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. 2018 Jan 22;11:3. doi: 10.1186/s13072-018-0173-5

Table 2.

Simulation parameters

Equations Parameter Value
1 κ 10KbT (reduced to 1KbT for Topo II simulations)
1, 2, 3, 4 .2 microns (twice the bead radius)
2, 3, 4 σ 21/6 where =.2 as in Eq. 1a
2 ε 3KbT
3 α π61/6σ2-2-1
3 β π-2α
3, 4 ξ 3KbT
5 m 77MDa (bead mass)
5 γ τ-1 where τ=σm/ε

aTo model the excluded volume of the nucleolus we use =.3 microns which is a sum of the bead radius and nucleolus radius