Table III.
Amplification | ||||||
---|---|---|---|---|---|---|
Target genes | Initialdenaturation (°C, min) | Denaturation (°C, sec) | Annealing (°C, sec) | Extension (°C, sec) | Cycles (n) | Final extension (°C, min) |
AP2 | 95, 6 | 95, 45 | 33, 45 | 72, 120 | 45 | 72, 10 |
TEM-1 | 94, 5 | 94, 60 | 55, 60 | 72, 50 | 30 | 72, 7 |
IMP | 94, 5 | 94, 60 | 55, 60 | 72, 50 | 30 | 72, 7 |
OXA-23 | 94, 5 | 94, 30 | 48, 30 | 72, 35 | 30 | 72, 10 |
OXA-24 | 94, 5 | 94, 30 | 48, 30 | 72, 35 | 30 | 72, 10 |
AmpC | 94, 5 | 94, 30 | 50, 30 | 72, 50 | 30 | 72, 10 |
aac(3)-I | 94, 5 | 94, 30 | 55, 30 | 72, 30 | 35 | 72, 10 |
aac(6′)-I | 94, 5 | 94, 30 | 55, 30 | 72, 30 | 35 | 72, 10 |
ant(3″)-I | 94, 5 | 94, 30 | 55, 30 | 72, 30 | 35 | 72, 10 |
rmtA | 93, 2 | 93, 20 | 55, 30 | 72, 30 | 30 | 72, 5 |
aph (3) | 93, 2 | 93, 20 | 55, 30 | 72, 30 | 30 | 72, 5 |
armA | 94, 5 | 94, 30 | 47, 30 | 72, 35 | 30 | 72, 10 |
rmtB | 94, 5 | 94, 30 | 55, 30 | 72, 60 | 30 | 72, 10 |
adeB | 95, 5 | 95, 30 | 53, 60 | 72, 60 | 30 | 72, 7 |
adeRS | 95, 5 | 95, 30 | 53, 40 | 72, 60 | 30 | 72, 7 |
Int-1 | 94, 5 | 94, 30 | 53, 30 | 72, 60 | 30 | 72, 10 |
ParC | 94, 4 | 94, 30 | 53, 30 | 72, 40 | 30 | 72, 7 |