Table 2.
Pathway annotation of differentially accumulated proteins in somatic embryogenesis
| No. | Pathway | DAPs (4172) | |
|---|---|---|---|
| 1 | Metabolic pathways | 1270 | 30.44% |
| 2 | Biosynthesis of secondary metabolites | 736 | 17.64% |
| 3 | Ribosome | 199 | 4.77% |
| 4 | Spliceosome | 174 | 4.17% |
| 5 | Protein processing in endoplasmic reticulum | 168 | 4.03% |
| 6 | RNA transport | 167 | 4.00% |
| 7 | Glycolysis/gluconeogenesis | 129 | 3.09% |
| 8 | Plant hormone signal transduction | 121 | 2.90% |
| 9 | Plant-pathogen interaction | 120 | 2.88% |
| 10 | mRNA surveillance pathway | 111 | 2.66% |
| 11 | Starch and sucrose metabolism | 110 | 2.64% |
| 12 | Purine metabolism | 108 | 2.59% |
| 13 | Pyruvate metabolism | 107 | 2.56% |
| 14 | Phenylpropanoid biosynthesis | 100 | 2.40% |
| 15 | Amino sugar and nucleotide sugar metabolism | 95 | 2.28% |
| 16 | Oxidative phosphorylation | 90 | 2.16% |
| 17 | Pyrimidine metabolism | 82 | 1.97% |
| 18 | RNA degradation | 81 | 1.94% |
| 19 | Endocytosis | 75 | 1.80% |
| 20 | Carbon fixation in photosynthetic organisms | 74 | 1.77% |
| 21 | Glutathione metabolism | 71 | 1.7% |
| 22 | Peroxisome | 60 | 1.44% |
| 23 | Ascorbate and aldarate metabolism | 57 | 1.37% |
| 24 | Proteasome | 56 | 1.34% |
| 25 | Arginine and proline metabolism | 53 | 1.27% |