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. Author manuscript; available in PMC: 2018 Jan 23.
Published in final edited form as: IEEE Trans Biomed Eng. 2013 Feb 5;60(8):2089–2099. doi: 10.1109/TBME.2013.2245129

TABLE I.

Fifty Nuclear Architecture Features Used in This Paper, Derived From VD, DT, and MST Graphs, as Well as NN Statistics

Type Name
VD (13) Total area of polygons
Polygon area: mean, std dev, min/max ratio, disorder
Polygon perimeter: mean, std dev, min/max ratio, disorder
Polygon chord length: mean, std dev, min/max ratio, disorder
DT (8) Triangle side length: mean, std dev, min/max ratio, disorder
Triangle area: mean, std dev, min/max ratio, disorder
MST (4) Edge length: mean, std dev, min/max ratio, disorder
NN (25) Nuclear density
Distance to 3 nearest nuclei: mean, std dev, disorder
Distance to 5 nearest nuclei: mean, std dev, disorder
Distance to 7 nearest nuclei: mean, std dev., disorder
# nuclei in 10 µm radius: mean, std dev, disorder
# nuclei in 20 µm radius: mean, std dev, disorder
# nuclei in 30 µm radius: mean, std dev, disorder
# nuclei in 40 µm radius: mean, std dev, disorder
# nuclei in 50 µm radius: mean, std dev, disorder