Table 6.
GO terms in up-regulated DEGs that showed specific enrichment to A. scabra
| GO ID | Ontology | Term | Level | Transcript ID | Annotation | Log2 FC in A. scabra |
|---|---|---|---|---|---|---|
| GO:0042546 | biological_process | cell wall biogenesis | 2 | TRINITY_DN116019_c0_g1 | Omega-hydroxypalmitate O-feruloyl transferase | 7.48 |
| GO:0010410 | biological_process | hemicellulose metabolic process | 4 | TRINITY_DN127707_c4_g25 | XET25 | 6.60 |
| TRINITY_DN117099_c7_g1 | XET9 | 6.42 | ||||
| TRINITY_DN113328_c0_g1 | Fasciclin-like arabinogalactan protein 11 | 4.87 | ||||
| TRINITY_DN113946_c0_g1 | Fasciclin-like arabinogalactan protein 11 | 4.04 | ||||
| TRINITY_DN130813_c0_g2 | Homeobox protein knotted-1-like 3 | 3.69 | ||||
| TRINITY_DN136911_c1_g3 | Cellulose synthase A | 2.43 | ||||
| TRINITY_DN132925_c0_g1 | COBRA-like protein 7 | 2.25 | ||||
| TRINITY_DN122927_c3_g1 | COBRA-like protein 5 | 2.24 | ||||
| TRINITY_DN121898_c1_g6 | Probable glucuronosyltransferase | 2.18 | ||||
| TRINITY_DN121458_c1_g7 | XET8 | 2.00 | ||||
| TRINITY_DN133427_c0_g2 | Microtubule-associated protein 70–4 | 1.93 | ||||
| TRINITY_DN134298_c1_g3 | Delta(24)-sterol reductase | 1.62 | ||||
| TRINITY_DN117099_c6_g2 | XET8 | 1.33 | ||||
| GO:0016042 | biological_process | lipid catabolic process | 5 | TRINITY_DN125263_c6_g4 | GDSL esterase | 8.66 |
| TRINITY_DN118385_c1_g5 | Phospholipase A1 | 7.60 | ||||
| TRINITY_DN123914_c1_g1 | GDSL esterase | 6.52 | ||||
| TRINITY_DN123914_c0_g1 | GDSL esterase | 5.69 | ||||
| TRINITY_DN129053_c1_g4 | GDSL esterase | 5.60 | ||||
| TRINITY_DN119083_c0_g10 | GDSL esterase | 5.59 | ||||
| TRINITY_DN120545_c1_g2 | GDSL esterase | 5.58 | ||||
| TRINITY_DN125263_c6_g1 | GDSL esterase | 5.36 | ||||
| TRINITY_DN119083_c0_g5 | GDSL esterase | 5.24 | ||||
| TRINITY_DN135699_c2_g7 | GDSL esterase | 5.13 | ||||
| TRINITY_DN127509_c3_g4 | Patatin-like protein 1 | 4.99 | ||||
| TRINITY_DN99646_c0_g5 | Phospholipase A1 | 4.29 | ||||
| TRINITY_DN115628_c0_g1 | GDSL esterase | 4.18 | ||||
| TRINITY_DN128761_c1_g2 | Patatin-like protein 1 | 4.06 | ||||
| TRINITY_DN116954_c1_g1 | GDSL esterase | 3.62 | ||||
| TRINITY_DN120720_c3_g15 | GDSL esterase | 3.43 | ||||
| TRINITY_DN133700_c2_g80 | Phospholipase A1 | 3.32 | ||||
| TRINITY_DN120720_c3_g13 | GDSL esterase | 3.17 | ||||
| TRINITY_DN119289_c2_g1 | GDSL esterase | 2.65 | ||||
| TRINITY_DN121510_c0_g2 | GDSL esterase | 1.67 | ||||
| TRINITY_DN128701_c2_g1 | GDSL esterase | 1.64 | ||||
| TRINITY_DN132161_c0_g2 | Phospholipase A1 | 1.57 | ||||
| TRINITY_DN123294_c0_g3 | GDSL esterase | 1.48 | ||||
| GO:0018958 | biological_process | phenol-containing compound metabolic process | 4 | TRINITY_DN89062_c0_g1 | Dirigent protein 5 | 4.30 |
| GO:0009807 | biological_process | lignan biosynthetic process | 8 | TRINITY_DN104484_c1_g1 | Aureusidin synthase 1 | 4.04 |
| TRINITY_DN120244_c9_g1 | (+)-larreatricin hydroxylase 1 | 1.79 | ||||
| GO:0055129 | biological_process | L-proline biosynthetic process | 10 | TRINITY_DN120079_c1_g2 | Pyrroline-5-carboxylate reductase | 1.82 |
| TRINITY_DN130046_c0_g1 | Pyrroline-5-carboxylate reductase | 1.55 | ||||
| TRINITY_DN122160_c0_g6 | Pyrroline-5-carboxylate reductase | 1.52 | ||||
| TRINITY_DN131421_c3_g6 | Pyrroline-5-carboxylate reductase | 1.28 | ||||
| GO:0006869 | biological_process | lipid transport | 5 | TRINITY_DN125947_c0_g1 | Non-specific lipid-transfer protein 4 | 6.57 |
| GO:0008289 | molecular_function | lipid binding | 1 | TRINITY_DN135528_c2_g5 | Non-specific lipid-transfer protein 2B | 5.14 |
| TRINITY_DN87604_c1_g1 | Non-specific lipid-transfer protein 41 | 3.83 | ||||
| TRINITY_DN102031_c0_g5 | Non-specific lipid-transfer protein | 3.03 | ||||
| TRINITY_DN127764_c3_g2 | Non-specific lipid-transfer protein 2B | 2.78 | ||||
| TRINITY_DN95559_c0_g1 | Non-specific lipid-transfer protein 2G | 2.75 | ||||
| TRINITY_DN127764_c3_g1 | Non-specific lipid-transfer protein 2B | 1.57 | ||||
| TRINITY_DN130844_c0_g2 | Acyl-CoA-binding domain-containing protein 4 | 1.43 | ||||
| TRINITY_DN112894_c3_g4 | Non-specific lipid-transfer protein 41 | 1.41 | ||||
| TRINITY_DN112894_c3_g6 | Non-specific lipid-transfer protein 41 | 1.07 | ||||
| GO:0004497 | molecular_function | monooxygenase activity | 1 | TRINITY_DN117000_c0_g3 | Protochlorophyllide-dependent translocon component 52 | 7.12 |
| GO:0016705 | molecular_function | oxidoreductase activity | 1 | TRINITY_DN134046_c0_g6 | Cytochrome P450 89A2 | 6.98 |
| TRINITY_DN133782_c0_g2 | Cytochrome P450 77A3 | 6.45 | ||||
| GO:0020037 | molecular_function | heme binding | 2 | TRINITY_DN134164_c0_g6 | Cytochrome P450 89A2 | 6.36 |
| TRINITY_DN99451_c0_g1 | Indole-3-pyruvate monooxygenase YUCCA11 | 6.21 | ||||
| TRINITY_DN127254_c0_g1 | Cytochrome P450 86A4 | 6.05 | ||||
| TRINITY_DN134164_c0_g7 | Cytochrome P450 89A2 | 5.89 | ||||
| TRINITY_DN129074_c0_g1 | Cytochrome P450 94C1 | 5.78 | ||||
| TRINITY_DN120580_c1_g2 | Cytochrome P450 86A22 | 5.69 | ||||
| TRINITY_DN103063_c0_g1 | Cytochrome P450 75A3 | 5.67 | ||||
| TRINITY_DN124228_c3_g1 | Cytochrome P450 94C1 | 5.39 | ||||
| TRINITY_DN116183_c0_g6 | Protochlorophyllide-dependent translocon component 52 | 5.26 | ||||
| TRINITY_DN125214_c0_g1 | Cytochrome P450 71D312 | 4.71 | ||||
| TRINITY_DN124182_c0_g3 | Alkane hydroxylase MAH1 | 4.22 | ||||
| TRINITY_DN126873_c0_g2 | Cytochrome P450 78A6 | 3.92 | ||||
| TRINITY_DN123592_c1_g1 | Cytochrome P450 70B3 | 3.62 | ||||
| TRINITY_DN136599_c1_g5 | 3,9-dihydroxypterocarpan 6A–monooxygenase | 2.59 | ||||
| TRINITY_DN135842_c0_g6 | Flavonoid 3′-monooxygenase | 2.48 | ||||
| TRINITY_DN121742_c2_g6 | Isoflavone 2′-hydroxylase | 2.05 | ||||
| TRINITY_DN116991_c0_g2 | Trans-cinnamate 4-monooxygenase | 1.95 | ||||
| TRINITY_DN129987_c5_g80 | Methylsterol monooxygenase 1–2 | 1.91 | ||||
| TRINITY_DN132664_c1_g1 | Cytochrome P450 90A1 | 1.86 | ||||
| TRINITY_DN114050_c0_g2 | Methylsterol monooxygenase 1–2 | 1.36 | ||||
| GO:0004338 | molecular_function | glucan exo-1,3-beta-glucosidase activity | 1 | TRINITY_DN129035_c0_g2 | Alpha-galactosidase | 7.29 |
| GO:0004567 | molecular_function | beta-mannosidase activity | 1 | TRINITY_DN133682_c0_g9 | Beta-glucosidase 7 | 5.58 |
| GO:0015925 | molecular_function | galactosidase activity | 1 | TRINITY_DN132224_c1_g7 | Beta-glucosidase 7 | 5.07 |
| GO:0033907 | molecular_function | beta-D-fucosidase activity | 1 | TRINITY_DN128665_c0_g1 | Beta-glucosidase 8 | 3.16 |
| GO:0047701 | molecular_function | beta-L-arabinosidase activity | 1 | TRINITY_DN131596_c0_g2 | Beta-glucosidase 26 | 3.06 |
| GO:0080079 | molecular_function | cellobiose glucosidase activity | 1 | TRINITY_DN137358_c2_g12 | Galactinol-sucrose galactosyltransferase 2 | 2.91 |
| GO:0080083 | molecular_function | beta-gentiobiose beta-glucosidase activity | 1 | TRINITY_DN130314_c0_g7 | Beta-glucosidase 8 | 2.84 |
| TRINITY_DN129035_c0_g1 | Alpha-galactosidase | 2.61 | ||||
| TRINITY_DN131467_c0_g5 | Beta-glucosidase 9 | 2.19 |
The transcriptional regulations under heat stress, log2 fold change (log2 FC), in these GO terms are also listed