Table 1.
Primer pairs used for qRT-PCR analysis of candidate reference genes and HSP70, a target gene
Gene symbol | Gene name | Accession number | Sequence (5′–3′) | Product length (bp) | Efficiency (%) | Tm (°C) | R2 |
---|---|---|---|---|---|---|---|
β-ACT | Beta-Actin | KF018928.1 | F: TCTTGGGAATGGAATCTTGC | 254 | 98.10 | 60 | 0.994 |
R: GGACAGAGAAGCCAAGATGG | |||||||
18S | 18S ribosomal | KF018922.1 | F: ATTGACGGAAGGGCACC | 157 | 106.09 | 60 | 0.998 |
R: CGCTCCACCAACTAAGAACG | |||||||
28S | 28S ribosomal | KC796354.1 | F: GAGGTCCGTAGCGATTCTGA | 105 | 99.25 | 60 | 0.996 |
R: GAGGGAAACTTCGGAGGGA | |||||||
GAPDH | Glyceraldehyde-3-phosphate dehydrogenase | KP676380 | F: ACTACTGTTCATGCAACCACCG | 272 | 94.47 | 60 | 0.998 |
R: GCTGCTTCCTTAACCTTATCCT | |||||||
EF1α | Elongation factor 1 alpha | EU019874.1 | F: GAAGCCTGGTATGGTTGTCGT | 187 | 107.53 | 60 | 0.998 |
R: GGGTGGGTTGTTCTTTGTG | |||||||
TBP | TATA box binding protein | AGT79997.1 | F: TGCTCCGAGTGAAGAAAAGG | 171 | 103.78 | 60 | 0.994 |
R: ACGGGCAAATGACTAGTGGA | |||||||
RPL7 | Ribosomal protein L7 | KP676382 | F: TGCCGGAGTCTGTACTCAA | 255 | 94.70 | 60 | 0.999 |
R: TCACACCACGAATACGCA | |||||||
α-TUB | Alpha-Tubulin | KP676379 | F: CCGTCAATTGTTCCACCCTG | 195 | 91.33 | 60 | 0.998 |
R: CCAGATCCAGTACCACCTCC | |||||||
HSP70 | Heat shock protein 70 gene | KP676381 | F: TCGCCTGTCTCAAGCCGAAAT | 98 | 102.99 | 60 | 0.991 |
R: GGTTCTTTGCCGCGATCTTG |
F, forward primer; R, reverse primer; Tm, melting temperature; R2, coefficient of correlation.