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. 2018 Jan 19;4:98. doi: 10.3389/fmolb.2017.00098

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Copyright © 2018 Zhao and Liu.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Phylogenetic relationships of chaperonin proteins from bacteria, chloroplasts, and mitochondria. The tree was generated using Phylogeny (http://www.phylogeny.fr/). Protein sequences of E. coli, H. sapiens, and M. musculus chaperonin are from UniProt database [GroEL (P0A6F5), HsHsp60 (P108090), MmHsp60 (P63038)]. Protein sequence of plant mitochondria and chloroplast chaperonins are from Phytozome, TAIR and RGAP [CrHsp60 (Cre06.g309100), AtHsp60-2 (AT2G33210), AtHsp60-3A (AT3G13860), AtHsp60-3B (AT3G23990), OsHsp60-1 (Os10g32550), OsHsp60-2 (Os03g04970), OsHsp60-3 (Os05g46290), CrCpn60α (Cre04.g231222), CrCpn60β1(Cre17.g741450), CrCpn60β2 (Cre07.g339150), AtCpn60α1 (At5g18820), AtCpn60α2 (At2g28000), AtCpn60β1 (At5g56500), AtCpn60β2 (At3g13470), AtCpn60β3 (At1g55490), AtCpn60β4 (At1g26230), OsCpn60α1 (Os12g17910), OsCpn60α2 (Os03g64210), OsCpn60α3 (Os09g38980), OsCpn60β1 (Os06g02380), OsCpn60β2 (Os02g01280), OsCpn60β3 (ChrSy.fgenesh.gene.28)]. The molecular structure was generated by UCSF Chimera (Pettersen et al., 2004) using CrCpn60β1coodinates 5CDI from Protein Data Bank.